Browse of TCMCG017C29309 protein

CDS

Accession Number	TCMCG017C29309
gbkey	CDS
Protein Id	OMO64669.1
Location	join(45768..45834,46205..46264,46392..46463,46600..46698,47099..47219,47293..47370,47526..47559,47632..47700,47830..47904)
GeneID	InterPro:IPR005574
Organism	Corchorus olitorius
locus_tag	COLO4_31953

Protein

Length	224aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01020885.1
Definition	RNA polymerase II, Rpb4 [Corchorus olitorius]
Locus_tag	COLO4_31953

EGGNOG-MAPPER Annotation

COG_category	K
Description	DNA-directed RNA polymerases IV and V subunit
KEGG_TC	-
KEGG_Module	M00180        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03021        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K03012        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] ko05016        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map03020        [VIEW IN KEGG] map05016        [VIEW IN KEGG] map05169        [VIEW IN KEGG]
GOs	-

Sequence

CDS:   ATGTCGGAGAAGGGAGGCAAAGGGTTTTCATTGCCCAAATCTTCTCTCAAATCTACCGCTAATAGTGGAAAAGATGATGATTCAGCAAAATCAAAGAGGGGAAGGAAAGTGCAGTTTGGAGCTGAAGGTTCACCAGATCTTAACTTTAGTTTCTCGTCGCGAAAATCAGATGGCAAGTTTGCTACCCCTATTGGTAAAGGTGACTGGGCTAAGGGAGGAAAAGGAGAAAAGGCAGTCAATGGTGGAAAAACTTCTGTGGCAAAAGAAGCAAAGTCATTGGAGCTCAGAGTTGAACAGGAACTTCAAGGTAATCAAGGTACTGTTAAATGCATCATGGATTGTGAGGCTGCAAATATCTTAGAAGGAATCCAGGAACAAATGGTTATGCTCTCTGAAGACTCAACTATTAAGCTCCCCGAATCATTTAATATGGGACTGCAGTATGCCAAGACCGGTAGCTATTATACTAATCCCCAGTCTGTCAGACAAGTTCTTGAGACTCTTTCAAAATATGGTGTCACTGACAGCGAGATTTGTGTGATTGGAAATGCTTGTCCTGAAACTACCGATGAAGTTTTTGCTCTTGTGCGATCCTTGGAGGCCAAGAGAAGCAGGCTCAGTGAACCACTTAAAGATGTATTGGATGAGCTAGCTAAACTGAAACAATCCAGCTGA

Protein:   MSEKGGKGFSLPKSSLKSTANSGKDDDSAKSKRGRKVQFGAEGSPDLNFSFSSRKSDGKFATPIGKGDWAKGGKGEKAVNGGKTSVAKEAKSLELRVEQELQGNQGTVKCIMDCEAANILEGIQEQMVMLSEDSTIKLPESFNMGLQYAKTGSYYTNPQSVRQVLETLSKYGVTDSEICVIGNACPETTDEVFALVRSLEAKRSRLSEPLKDVLDELAKLKQSS